This equipment can handle medical waste such as medical infection, injury and pathology, and carry out harmless disposal of medical waste. Equipment integrated design, a full set of equipment low energy consumption, automatic operation, simple operation, anytime and anywhere treatment of medical waste, fixed, mobile can be customized according to demand, convenient and flexible. Microwave disinfection treatment system is an integrated equipment, the equipment at least by automatic feeding unit, shredding unit, microwave disinfection sterilization unit, steam heating system, discharging unit, , exhaust dedusting systems and alarm system.